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Staff

Associate Professor Mark Davies

Laboratory Head

Overview

Associate Professor Mark Davies completed his PhD at the Queensland Institute of Medical Research in 2007, before undertaking postdoctoral studies at the University of York in the UK. In 2009, he was awarded an NHMRC postdoctoral training fellowship within the laboratory of Professor Gordon Dougan at the Wellcome Trust Sanger Institute, UK and Prof Mark Walker the University of Queensland.  In late 2015, he was appointed as the Inaugural Doherty – Sanger Fellow within the Department of Microbiology and Immunology. His principle research interests are in the application of genome sequencing approaches to understanding emergence and evolution of key bacterial pathogens including Streptococcus pyogenes.

Publications

Selected publications

Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
2025 · preprint
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Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
2025 · preprint
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Inter-species gene flow drives ongoing evolution of Streptococcus pyogenes and Streptococcus dysgalactiae subsp. equisimilis
2025 · journal-article
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